WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H6.7.1 Sequence Name  F56H6.7.1
Length (nt)  2400   Chromosome Location  I: 12297734-12300817
Chromosome . Primary Identifier  I Chromosome Location . Start  12297734
Chromosome Location . End  12300817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010168 F56H6.7 F56H6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H6.7 F56H6.7 2400   I: 12297734-12297961

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.7.1 12297734 12300817 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31948   228   I: 12297734-12297961 Caenorhabditis elegans
Exon31949   115   I: 12298013-12298127 Caenorhabditis elegans
Exon31950   123   I: 12298177-12298299 Caenorhabditis elegans
Exon31951   79   I: 12298344-12298422 Caenorhabditis elegans
Exon31952   79   I: 12298470-12298548 Caenorhabditis elegans
Exon31953   107   I: 12298596-12298702 Caenorhabditis elegans
Exon31954   165   I: 12298746-12298910 Caenorhabditis elegans
Exon31955   321   I: 12298956-12299276 Caenorhabditis elegans
Exon31956   283   I: 12299325-12299607 Caenorhabditis elegans
Exon31957   373   I: 12299731-12300103 Caenorhabditis elegans
Exon31958   172   I: 12300146-12300317 Caenorhabditis elegans
Exon31959   120   I: 12300364-12300483 Caenorhabditis elegans
Exon31960   135   I: 12300534-12300668 Caenorhabditis elegans
Exon31961   100   I: 12300718-12300817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.7.1 12297734 12300817 1

1 Sequence

Length
2400

1 Sequence Ontology Term

Identifier Name Description
transcript