WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H6.9.1 Sequence Name  F56H6.9.1
Length (nt)  2409   Chromosome Location  I: 12303599-12306820
Chromosome . Primary Identifier  I Chromosome Location . Start  12303599
Chromosome Location . End  12306820 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010170 F56H6.9 F56H6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H6.9 F56H6.9 2409   I: 12303599-12303817

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.9.1 12303599 12306820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31965   219   I: 12303599-12303817 Caenorhabditis elegans
Exon31966   115   I: 12303870-12303984 Caenorhabditis elegans
Exon31967   123   I: 12304034-12304156 Caenorhabditis elegans
Exon31968   79   I: 12304200-12304278 Caenorhabditis elegans
Exon31969   79   I: 12304331-12304409 Caenorhabditis elegans
Exon31970   107   I: 12304458-12304564 Caenorhabditis elegans
Exon31971   165   I: 12304649-12304813 Caenorhabditis elegans
Exon31972   321   I: 12304860-12305180 Caenorhabditis elegans
Exon31973   206   I: 12305229-12305434 Caenorhabditis elegans
Exon31974   83   I: 12305482-12305564 Caenorhabditis elegans
Exon31975   548   I: 12305752-12306299 Caenorhabditis elegans
Exon31976   120   I: 12306349-12306468 Caenorhabditis elegans
Exon31977   138   I: 12306531-12306668 Caenorhabditis elegans
Exon31978   106   I: 12306715-12306820 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.9.1 12303599 12306820 1

1 Sequence

Length
2409

1 Sequence Ontology Term

Identifier Name Description
transcript