WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H6.7.1 Sequence Name  F56H6.7.1
Length (nt)  2400   Chromosome Location  I: 12297734-12300817
Chromosome . Primary Identifier  I Chromosome Location . Start  12297734
Chromosome Location . End  12300817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010168 F56H6.7 F56H6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H6.7 F56H6.7 2400   I: 12297734-12297961

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.7.1 12297734 12300817 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31974   228   I: 12297734-12297961 Caenorhabditis elegans
Exon31975   115   I: 12298013-12298127 Caenorhabditis elegans
Exon31976   123   I: 12298177-12298299 Caenorhabditis elegans
Exon31977   79   I: 12298344-12298422 Caenorhabditis elegans
Exon31978   79   I: 12298470-12298548 Caenorhabditis elegans
Exon31979   107   I: 12298596-12298702 Caenorhabditis elegans
Exon31980   165   I: 12298746-12298910 Caenorhabditis elegans
Exon31981   321   I: 12298956-12299276 Caenorhabditis elegans
Exon31982   283   I: 12299325-12299607 Caenorhabditis elegans
Exon31983   373   I: 12299731-12300103 Caenorhabditis elegans
Exon31984   172   I: 12300146-12300317 Caenorhabditis elegans
Exon31985   120   I: 12300364-12300483 Caenorhabditis elegans
Exon31986   135   I: 12300534-12300668 Caenorhabditis elegans
Exon31987   100   I: 12300718-12300817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.7.1 12297734 12300817 1

1 Sequence

Length
2400

1 Sequence Ontology Term

Identifier Name Description
transcript