WormMine: Gene WBGene00199719

• WormBase Gene ID: WBGene00199719
• Gene Name: C47F8.10
• Sequence Name: C47F8.10
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by pmt-2 and nmad-1 based on microarray and RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 151

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00199719

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C47F8.10	C47F8.10	151	I: 12324795-12324945

Other

0 CDSs

0 RNAi Result

5 Allele

• gk962706
• gk963849
• gk962859
• gk964175
• gk963095

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00199719
• Start: 12324795
• End: 12324945
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrI_12324946..12326342
• Length (nt): 1397
• Chromosome Location: I: 12324946-12326342
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector.	Fold-change > 1.5, ANOVA P values < 0.05.	WBPaper00055482:pmt-2(RNAi)_downregulated
	Transcripts that showed siginificantly decreased expression in nmad-1(ok3133) comparing to in N2 at 25 entigrade.	edgeR, FDR < 0.05, fold change > 2.	WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00199719
• Start: 12324795
• End: 12324945
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 151

1 Sequence Ontology Term