WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E11.10.1 Sequence Name  T09E11.10.1
Length (nt)  1017   Chromosome Location  I: 12345819-12347265
Chromosome . Primary Identifier  I Chromosome Location . Start  12345819
Chromosome Location . End  12347265 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E11.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011659 T09E11.10 T09E11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E11.10 T09E11.10 1017   I: 12345819-12346034

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.10.1 12345819 12347265 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32067   216   I: 12345819-12346034 Caenorhabditis elegans
Exon32068   121   I: 12346081-12346201 Caenorhabditis elegans
Exon32069   218   I: 12346251-12346468 Caenorhabditis elegans
Exon32070   332   I: 12346687-12347018 Caenorhabditis elegans
Exon32071   75   I: 12347073-12347147 Caenorhabditis elegans
Exon32072   55   I: 12347211-12347265 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.10.1 12345819 12347265 -1

1 Sequence

Length
1017

1 Sequence Ontology Term

Identifier Name Description
transcript