WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E11.7.1 Sequence Name  T09E11.7.1
Length (nt)  1992   Chromosome Location  I: 12353506-12356337
Chromosome . Primary Identifier  I Chromosome Location . Start  12353506
Chromosome Location . End  12356337 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E11.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011656 oac-45 T09E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E11.7 T09E11.7 1992   I: 12353506-12353630

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.7.1 12353506 12356337 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32088   125   I: 12353506-12353630 Caenorhabditis elegans
Exon32090   404   I: 12353674-12354077 Caenorhabditis elegans
Exon32091   274   I: 12354128-12354401 Caenorhabditis elegans
Exon32092   231   I: 12354459-12354689 Caenorhabditis elegans
Exon32093   164   I: 12354963-12355126 Caenorhabditis elegans
Exon32094   107   I: 12355194-12355300 Caenorhabditis elegans
Exon32095   121   I: 12355367-12355487 Caenorhabditis elegans
Exon32096   112   I: 12355537-12355648 Caenorhabditis elegans
Exon32097   208   I: 12355692-12355899 Caenorhabditis elegans
Exon32098   246   I: 12356092-12356337 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.7.1 12353506 12356337 1

1 Sequence

Length
1992

1 Sequence Ontology Term

Identifier Name Description
transcript