WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E11.5.1 Sequence Name  T09E11.5.1
Length (nt)  1953   Chromosome Location  I: 12356942-12359341
Chromosome . Primary Identifier  I Chromosome Location . Start  12356942
Chromosome Location . End  12359341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011654 oac-44 T09E11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E11.5 T09E11.5 1953   I: 12356942-12357066

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.5.1 12356942 12359341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32099   125   I: 12356942-12357066 Caenorhabditis elegans
Exon32100   404   I: 12357111-12357514 Caenorhabditis elegans
Exon32101   241   I: 12357565-12357805 Caenorhabditis elegans
Exon32102   231   I: 12357865-12358095 Caenorhabditis elegans
Exon32103   164   I: 12358162-12358325 Caenorhabditis elegans
Exon32104   107   I: 12358372-12358478 Caenorhabditis elegans
Exon32105   121   I: 12358522-12358642 Caenorhabditis elegans
Exon32106   112   I: 12358694-12358805 Caenorhabditis elegans
Exon32107   202   I: 12358848-12359049 Caenorhabditis elegans
Exon32108   246   I: 12359096-12359341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.5.1 12356942 12359341 1

1 Sequence

Length
1953

1 Sequence Ontology Term

Identifier Name Description
transcript