WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E11.4.1 Sequence Name  T09E11.4.1
Length (nt)  1980   Chromosome Location  I: 12359942-12363416
Chromosome . Primary Identifier  I Chromosome Location . Start  12359942
Chromosome Location . End  12363416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011653 oac-43 T09E11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E11.4 T09E11.4 1980   I: 12359942-12360066

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.4.1 12359942 12363416 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32109   125   I: 12359942-12360066 Caenorhabditis elegans
Exon32111   404   I: 12360110-12360513 Caenorhabditis elegans
Exon32112   265   I: 12360937-12361201 Caenorhabditis elegans
Exon32113   231   I: 12361252-12361482 Caenorhabditis elegans
Exon32114   164   I: 12361635-12361798 Caenorhabditis elegans
Exon32115   107   I: 12361853-12361959 Caenorhabditis elegans
Exon32116   121   I: 12362102-12362222 Caenorhabditis elegans
Exon32117   112   I: 12362268-12362379 Caenorhabditis elegans
Exon32118   205   I: 12362430-12362634 Caenorhabditis elegans
Exon32119   246   I: 12363171-12363416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E11.4.1 12359942 12363416 1

1 Sequence

Length
1980

1 Sequence Ontology Term

Identifier Name Description
transcript