WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T15D6.3.1 Sequence Name  T15D6.3.1
Length (nt)  1176   Chromosome Location  I: 12376904-12378674
Chromosome . Primary Identifier  I Chromosome Location . Start  12376904
Chromosome Location . End  12378674 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T15D6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001642 gly-17 T15D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T15D6.3 T15D6.3 1176   I: 12376904-12376954

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T15D6.3.1 12376904 12378674 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32157   51   I: 12376904-12376954 Caenorhabditis elegans
Exon32158   327   I: 12377000-12377326 Caenorhabditis elegans
Exon32159   75   I: 12377369-12377443 Caenorhabditis elegans
Exon32160   228   I: 12377536-12377763 Caenorhabditis elegans
Exon32161   132   I: 12377812-12377943 Caenorhabditis elegans
Exon32162   109   I: 12378212-12378320 Caenorhabditis elegans
Exon32163   89   I: 12378376-12378464 Caenorhabditis elegans
Exon32164   165   I: 12378510-12378674 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T15D6.3.1 12376904 12378674 -1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
transcript