WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54C8.1 Sequence Name  C54C8.1
Length (nt)  1071   Chromosome Location  I: 12442299-12442338
Chromosome . Primary Identifier  I Chromosome Location . Start  12442299
Chromosome Location . End  12442338
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36114 NHR-169 41.3 356 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00043117
WBRNAi00030127
WBRNAi00113958
WBRNAi00115765
WBRNAi00107343

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54C8.1 12442299 12442338 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008289 nhr-169 C54C8.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54C8.1 12442299 12442338 1
CDS:C54C8.1 12442385 12442603 1
CDS:C54C8.1 12442649 12442735 1
CDS:C54C8.1 12442796 12442965 1
CDS:C54C8.1 12443011 12443234 1
CDS:C54C8.1 12443290 12443491 1
CDS:C54C8.1 12443538 12443612 1
CDS:C54C8.1 12443675 12443728 1

1 Sequence

Length
1071

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54C8.1.1 C54C8.1.1 1123   I: 12442299-12443780