WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03H4.13.1 Sequence Name  E03H4.13.1
Length (nt)  993   Chromosome Location  I: 12439936-12441253
Chromosome . Primary Identifier  I Chromosome Location . Start  12439936
Chromosome Location . End  12441253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03H4.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003679 nhr-89 E03H4.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03H4.13 E03H4.13 933   I: 12439996-12440049

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03H4.13.1 12439936 12441253 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32323   114   I: 12439936-12440049 Caenorhabditis elegans
Exon32324   69   I: 12440094-12440162 Caenorhabditis elegans
Exon32325   420   I: 12440221-12440640 Caenorhabditis elegans
Exon32326   164   I: 12440713-12440876 Caenorhabditis elegans
Exon32327   66   I: 12440923-12440988 Caenorhabditis elegans
Exon32328   144   I: 12441043-12441186 Caenorhabditis elegans
Exon32329   16   I: 12441238-12441253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03H4.13.1 12439936 12441253 -1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
transcript