WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C8.5.1 Sequence Name  C54C8.5.1
Length (nt)  915   Chromosome Location  I: 12453389-12454764
Chromosome . Primary Identifier  I Chromosome Location . Start  12453389
Chromosome Location . End  12454764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008293 glct-5 C54C8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C8.5 C54C8.5 915   I: 12453389-12453492

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.5.1 12453389 12454764 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32333   104   I: 12453389-12453492 Caenorhabditis elegans
Exon32334   129   I: 12453781-12453909 Caenorhabditis elegans
Exon32335   323   I: 12453956-12454278 Caenorhabditis elegans
Exon32336   257   I: 12454358-12454614 Caenorhabditis elegans
Exon32337   102   I: 12454663-12454764 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.5.1 12453389 12454764 1

1 Sequence

Length
915

1 Sequence Ontology Term

Identifier Name Description
transcript