WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C8.6.1 Sequence Name  C54C8.6.1
Length (nt)  672   Chromosome Location  I: 12454853-12455826
Chromosome . Primary Identifier  I Chromosome Location . Start  12454853
Chromosome Location . End  12455826 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003098 lys-9 C54C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C8.6 C54C8.6 672   I: 12454853-12455110

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.6.1 12454853 12455826 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32338   258   I: 12454853-12455110 Caenorhabditis elegans
Exon32339   24   I: 12455365-12455388 Caenorhabditis elegans
Exon32340   244   I: 12455391-12455634 Caenorhabditis elegans
Exon32341   146   I: 12455681-12455826 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.6.1 12454853 12455826 -1

1 Sequence

Length
672

1 Sequence Ontology Term

Identifier Name Description
transcript