WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C54C8.7.1 Sequence Name  C54C8.7.1
Length (nt)  2736   Chromosome Location  I: 12458017-12460903
Chromosome . Primary Identifier  I Chromosome Location . Start  12458017
Chromosome Location . End  12460903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008294 clec-11 C54C8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C8.7 C54C8.7 1254   I: 12459499-12460274

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.7.1 12458017 12460903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32343   2258   I: 12458017-12460274 Caenorhabditis elegans
Exon32347   132   I: 12460319-12460450 Caenorhabditis elegans
Exon32348   142   I: 12460496-12460637 Caenorhabditis elegans
Exon32349   204   I: 12460700-12460903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.7.1 12458017 12460903 -1

1 Sequence

Length
2736

1 Sequence Ontology Term

Identifier Name Description
transcript