WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C8.11a.1 Sequence Name  C54C8.11a.1
Length (nt)  1263   Chromosome Location  I: 12462176-12465816
Chromosome . Primary Identifier  I Chromosome Location . Start  12462176
Chromosome Location . End  12465816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C8.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001640 gly-15 C54C8.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C8.11a C54C8.11a 1263   I: 12462176-12462261

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.11a.1 12462176 12465816 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32352   86   I: 12462176-12462261 Caenorhabditis elegans
Exon32353   265   I: 12462403-12462667 Caenorhabditis elegans
Exon32355   132   I: 12462903-12463034 Caenorhabditis elegans
Exon32358   102   I: 12463682-12463783 Caenorhabditis elegans
Exon32359   126   I: 12463837-12463962 Caenorhabditis elegans
Exon32360   87   I: 12464649-12464735 Caenorhabditis elegans
Exon32361   85   I: 12464778-12464862 Caenorhabditis elegans
Exon32362   165   I: 12464913-12465077 Caenorhabditis elegans
Exon32363   58   I: 12465231-12465288 Caenorhabditis elegans
Exon32364   157   I: 12465660-12465816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54C8.11a.1 12462176 12465816 1

1 Sequence

Length
1263

1 Sequence Ontology Term

Identifier Name Description
transcript