WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F6.2.1 Sequence Name  T27F6.2.1
Length (nt)  1304   Chromosome Location  I: 12476653-12478594
Chromosome . Primary Identifier  I Chromosome Location . Start  12476653
Chromosome Location . End  12478594 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012103 clec-12 T27F6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F6.2 T27F6.2 1266   I: 12476685-12477472

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27F6.2.1 12476653 12478594 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32377   820   I: 12476653-12477472 Caenorhabditis elegans
Exon32378   132   I: 12478018-12478149 Caenorhabditis elegans
Exon32379   142   I: 12478197-12478338 Caenorhabditis elegans
Exon32380   210   I: 12478385-12478594 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27F6.2.1 12476653 12478594 -1

1 Sequence

Length
1304

1 Sequence Ontology Term

Identifier Name Description
transcript