WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27F6.5a Sequence Name  T27F6.5a
Length (nt)  1365   Chromosome Location  I: 12487041-12487162
Chromosome . Primary Identifier  I Chromosome Location . Start  12487041
Chromosome Location . End  12487162
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F6.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16514 PARS-2, isoform a 50.6 454 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00036048
WBRNAi00093113
WBRNAi00093133
WBRNAi00071066
WBRNAi00116863
WBRNAi00061690
WBRNAi00054342
WBRNAi00004329
WBRNAi00026420
WBRNAi00026421

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27F6.5a 12487041 12487162 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004190 pars-2 T27F6.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27F6.5a 12487041 12487162 1
CDS:T27F6.5a 12487880 12488078 1
CDS:T27F6.5a 12488869 12489141 1
CDS:T27F6.5a 12489428 12489826 1
CDS:T27F6.5a 12490208 12490393 1
CDS:T27F6.5a 12490610 12490795 1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27F6.5a.1 T27F6.5a.1 1482   I: 12487017-12490888