WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33E2.2b.1 Sequence Name  F33E2.2b.1
Length (nt)  3100   Chromosome Location  I: 12565800-12572801
Chromosome . Primary Identifier  I Chromosome Location . Start  12565800
Chromosome Location . End  12572801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33E2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001008 dlk-1 F33E2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33E2.2b F33E2.2b 2766   I: 12566129-12566218

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33E2.2b.1 12565800 12572801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32558   419   I: 12565800-12566218 Caenorhabditis elegans
Exon32564   656   I: 12566721-12567376 Caenorhabditis elegans
Exon32568   160   I: 12568206-12568365 Caenorhabditis elegans
Exon32570   161   I: 12568457-12568617 Caenorhabditis elegans
Exon32574   382   I: 12569008-12569389 Caenorhabditis elegans
Exon32577   310   I: 12569518-12569827 Caenorhabditis elegans
Exon32581   150   I: 12569935-12570084 Caenorhabditis elegans
Exon32585   498   I: 12570181-12570678 Caenorhabditis elegans
Exon32590   160   I: 12570725-12570884 Caenorhabditis elegans
Exon32593   147   I: 12571429-12571575 Caenorhabditis elegans
Exon32597   57   I: 12572745-12572801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33E2.2b.1 12565800 12572801 -1

1 Sequence

Length
3100

1 Sequence Ontology Term

Identifier Name Description
transcript