WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H16D19.1.1 Sequence Name  H16D19.1.1
Length (nt)  1242   Chromosome Location  I: 12635172-12636542
Chromosome . Primary Identifier  I Chromosome Location . Start  12635172
Chromosome Location . End  12636542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H16D19.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010399 clec-13 H16D19.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H16D19.1 H16D19.1 1242   I: 12635172-12635369

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H16D19.1.1 12635172 12636542 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32699   198   I: 12635172-12635369 Caenorhabditis elegans
Exon32700   145   I: 12635417-12635561 Caenorhabditis elegans
Exon32701   132   I: 12635604-12635735 Caenorhabditis elegans
Exon32702   767   I: 12635776-12636542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H16D19.1.1 12635172 12636542 1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
transcript