WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H16D19.3.1 Sequence Name  H16D19.3.1
Length (nt)  996   Chromosome Location  I: 12638685-12640622
Chromosome . Primary Identifier  I Chromosome Location . Start  12638685
Chromosome Location . End  12640622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H16D19.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010401 H16D19.3 H16D19.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H16D19.3 H16D19.3 951   I: 12638730-12638852

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H16D19.3.1 12638685 12640622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32707   168   I: 12638685-12638852 Caenorhabditis elegans
Exon32708   135   I: 12639263-12639397 Caenorhabditis elegans
Exon32709   204   I: 12639557-12639760 Caenorhabditis elegans
Exon32710   159   I: 12639822-12639980 Caenorhabditis elegans
Exon32711   87   I: 12640245-12640331 Caenorhabditis elegans
Exon32712   243   I: 12640380-12640622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H16D19.3.1 12638685 12640622 1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
transcript