WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06G6.6a.1 Sequence Name  T06G6.6a.1
Length (nt)  912   Chromosome Location  I: 12718296-12719837
Chromosome . Primary Identifier  I Chromosome Location . Start  12718296
Chromosome Location . End  12719837 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06G6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011548 T06G6.6 T06G6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06G6.6a T06G6.6a 744   I: 12718382-12718439

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06G6.6a.1 12718296 12719837 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32921   144   I: 12718296-12718439 Caenorhabditis elegans
Exon32923   81   I: 12718767-12718847 Caenorhabditis elegans
Exon32924   113   I: 12718955-12719067 Caenorhabditis elegans
Exon32926   81   I: 12719113-12719193 Caenorhabditis elegans
Exon32928   134   I: 12719246-12719379 Caenorhabditis elegans
Exon32930   105   I: 12719429-12719533 Caenorhabditis elegans
Exon32933   254   I: 12719584-12719837 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06G6.6a.1 12718296 12719837 1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
transcript