WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02A11.4.1 Sequence Name  W02A11.4.1
Length (nt)  2741   Chromosome Location  I: 12741588-12749562
Chromosome . Primary Identifier  I Chromosome Location . Start  12741588
Chromosome Location . End  12749562 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02A11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006700 uba-2 W02A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02A11.4 W02A11.4 1749   I: 12741605-12741655

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02A11.4.1 12741588 12749562 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32949   68   I: 12741588-12741655 Caenorhabditis elegans
Exon32950   75   I: 12741710-12741784 Caenorhabditis elegans
Exon32951   220   I: 12741830-12742049 Caenorhabditis elegans
Exon32953   89   I: 12742414-12742502 Caenorhabditis elegans
Exon32954   137   I: 12742648-12742784 Caenorhabditis elegans
Exon32955   187   I: 12743492-12743678 Caenorhabditis elegans
Exon32956   492   I: 12744783-12745274 Caenorhabditis elegans
Exon32957   211   I: 12747227-12747437 Caenorhabditis elegans
Exon32958   1262   I: 12748301-12749562 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02A11.4.1 12741588 12749562 1

1 Sequence

Length
2741

1 Sequence Ontology Term

Identifier Name Description
transcript