WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18D10A.6b.1 Sequence Name  Y18D10A.6b.1
Length (nt)  2692   Chromosome Location  I: 12828402-12834163
Chromosome . Primary Identifier  I Chromosome Location . Start  12828402
Chromosome Location . End  12834163 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003735 nhx-8 Y18D10A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.6b Y18D10A.6b 1968   I: 12828477-12828498

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.6b.1 12828402 12834163 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33035   97   I: 12828402-12828498 Caenorhabditis elegans
Exon33037   142   I: 12828900-12829041 Caenorhabditis elegans
Exon33039   430   I: 12829906-12830335 Caenorhabditis elegans
Exon33042   318   I: 12830791-12831108 Caenorhabditis elegans
Exon33044   419   I: 12831843-12832261 Caenorhabditis elegans
Exon33046   259   I: 12832396-12832654 Caenorhabditis elegans
Exon33048   1027   I: 12833137-12834163 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.6b.1 12828402 12834163 1

1 Sequence

Length
2692

1 Sequence Ontology Term

Identifier Name Description
transcript