WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18D10A.7.1 Sequence Name  Y18D10A.7.1
Length (nt)  2833   Chromosome Location  I: 12835115-12843331
Chromosome . Primary Identifier  I Chromosome Location . Start  12835115
Chromosome Location . End  12843331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004231 ptr-17 Y18D10A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.7 Y18D10A.7 2718   I: 12835132-12835214

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.7.1 12835115 12843331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33049   100   I: 12835115-12835214 Caenorhabditis elegans
Exon33050   185   I: 12835274-12835458 Caenorhabditis elegans
Exon33051   182   I: 12835647-12835828 Caenorhabditis elegans
Exon33052   368   I: 12836452-12836819 Caenorhabditis elegans
Exon33053   251   I: 12837096-12837346 Caenorhabditis elegans
Exon33054   71   I: 12837413-12837483 Caenorhabditis elegans
Exon33055   265   I: 12837931-12838195 Caenorhabditis elegans
Exon33056   266   I: 12838920-12839185 Caenorhabditis elegans
Exon33057   81   I: 12839276-12839356 Caenorhabditis elegans
Exon33058   87   I: 12839414-12839500 Caenorhabditis elegans
Exon33059   117   I: 12839547-12839663 Caenorhabditis elegans
Exon33060   146   I: 12839920-12840065 Caenorhabditis elegans
Exon33061   119   I: 12841782-12841900 Caenorhabditis elegans
Exon33062   60   I: 12842014-12842073 Caenorhabditis elegans
Exon33063   114   I: 12842136-12842249 Caenorhabditis elegans
Exon33064   222   I: 12842478-12842699 Caenorhabditis elegans
Exon33065   199   I: 12843133-12843331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.7.1 12835115 12843331 1

1 Sequence

Length
2833

1 Sequence Ontology Term

Identifier Name Description
transcript