WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y18D10A.8.1 Sequence Name  Y18D10A.8.1
Length (nt)  2081   Chromosome Location  I: 12844269-12853130
Chromosome . Primary Identifier  I Chromosome Location . Start  12844269
Chromosome Location . End  12853130 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012478 mxt-1 Y18D10A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.8 Y18D10A.8 1524   I: 12844628-12844709

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.8.1 12844269 12853130 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33066   441   I: 12844269-12844709 Caenorhabditis elegans
Exon33067   138   I: 12847818-12847955 Caenorhabditis elegans
Exon33068   168   I: 12848124-12848291 Caenorhabditis elegans
Exon33069   162   I: 12848368-12848529 Caenorhabditis elegans
Exon33070   290   I: 12849181-12849470 Caenorhabditis elegans
Exon33071   117   I: 12849717-12849833 Caenorhabditis elegans
Exon33072   218   I: 12850794-12851011 Caenorhabditis elegans
Exon33073   229   I: 12851268-12851496 Caenorhabditis elegans
Exon33074   318   I: 12852813-12853130 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.8.1 12844269 12853130 1

1 Sequence

Length
2081

1 Sequence Ontology Term

Identifier Name Description
transcript