WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18D10A.13.1 Sequence Name  Y18D10A.13.1
Length (nt)  7731   Chromosome Location  I: 12878639-12902806
Chromosome . Primary Identifier  I Chromosome Location . Start  12878639
Chromosome Location . End  12902806 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003905 pad-1 Y18D10A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.13 Y18D10A.13 7254   I: 12878652-12878804

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.13.1 12878639 12902806 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33107   166   I: 12878639-12878804 Caenorhabditis elegans
Exon33108   94   I: 12879500-12879593 Caenorhabditis elegans
Exon33109   259   I: 12879747-12880005 Caenorhabditis elegans
Exon33110   190   I: 12880648-12880837 Caenorhabditis elegans
Exon33111   232   I: 12881296-12881527 Caenorhabditis elegans
Exon33112   477   I: 12882161-12882637 Caenorhabditis elegans
Exon33113   179   I: 12883224-12883402 Caenorhabditis elegans
Exon33114   211   I: 12883966-12884176 Caenorhabditis elegans
Exon33115   60   I: 12884460-12884519 Caenorhabditis elegans
Exon33116   990   I: 12885017-12886006 Caenorhabditis elegans
Exon33117   415   I: 12887898-12888312 Caenorhabditis elegans
Exon33118   640   I: 12889227-12889866 Caenorhabditis elegans
Exon33119   459   I: 12890259-12890717 Caenorhabditis elegans
Exon33120   203   I: 12891841-12892043 Caenorhabditis elegans
Exon33121   298   I: 12892101-12892398 Caenorhabditis elegans
Exon33122   525   I: 12893321-12893845 Caenorhabditis elegans
Exon33123   242   I: 12894493-12894734 Caenorhabditis elegans
Exon33124   515   I: 12895833-12896347 Caenorhabditis elegans
Exon33125   302   I: 12897332-12897633 Caenorhabditis elegans
Exon33126   163   I: 12898276-12898438 Caenorhabditis elegans
Exon33127   213   I: 12898906-12899118 Caenorhabditis elegans
Exon33128   323   I: 12901053-12901375 Caenorhabditis elegans
Exon33129   575   I: 12902232-12902806 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.13.1 12878639 12902806 1

1 Sequence

Length
7731

1 Sequence Ontology Term

Identifier Name Description
transcript