WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18D10A.13.1 Sequence Name  Y18D10A.13.1
Length (nt)  7731   Chromosome Location  I: 12878639-12902806
Chromosome . Primary Identifier  I Chromosome Location . Start  12878639
Chromosome Location . End  12902806 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003905 pad-1 Y18D10A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.13 Y18D10A.13 7254   I: 12878652-12878804

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.13.1 12878639 12902806 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33133   166   I: 12878639-12878804 Caenorhabditis elegans
Exon33134   94   I: 12879500-12879593 Caenorhabditis elegans
Exon33135   259   I: 12879747-12880005 Caenorhabditis elegans
Exon33136   190   I: 12880648-12880837 Caenorhabditis elegans
Exon33137   232   I: 12881296-12881527 Caenorhabditis elegans
Exon33138   477   I: 12882161-12882637 Caenorhabditis elegans
Exon33139   179   I: 12883224-12883402 Caenorhabditis elegans
Exon33140   211   I: 12883966-12884176 Caenorhabditis elegans
Exon33141   60   I: 12884460-12884519 Caenorhabditis elegans
Exon33142   990   I: 12885017-12886006 Caenorhabditis elegans
Exon33143   415   I: 12887898-12888312 Caenorhabditis elegans
Exon33144   640   I: 12889227-12889866 Caenorhabditis elegans
Exon33145   459   I: 12890259-12890717 Caenorhabditis elegans
Exon33146   203   I: 12891841-12892043 Caenorhabditis elegans
Exon33147   298   I: 12892101-12892398 Caenorhabditis elegans
Exon33148   525   I: 12893321-12893845 Caenorhabditis elegans
Exon33149   242   I: 12894493-12894734 Caenorhabditis elegans
Exon33150   515   I: 12895833-12896347 Caenorhabditis elegans
Exon33151   302   I: 12897332-12897633 Caenorhabditis elegans
Exon33152   163   I: 12898276-12898438 Caenorhabditis elegans
Exon33153   213   I: 12898906-12899118 Caenorhabditis elegans
Exon33154   323   I: 12901053-12901375 Caenorhabditis elegans
Exon33155   575   I: 12902232-12902806 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.13.1 12878639 12902806 1

1 Sequence

Length
7731

1 Sequence Ontology Term

Identifier Name Description
transcript