WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08A8.1b Sequence Name  F08A8.1b
Length (nt)  1689   Chromosome Location  I: 12939331-12939977
Chromosome . Primary Identifier  I Chromosome Location . Start  12939331
Chromosome Location . End  12939977
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A8.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36125 ACOX-1.1, isoform b 63.4 562 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00043950
WBRNAi00003335
WBRNAi00116604
WBRNAi00089524
WBRNAi00115598
WBRNAi00113942
WBRNAi00092598
WBRNAi00092965
WBRNAi00102611
WBRNAi00115708
WBRNAi00115599
WBRNAi00115699

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08A8.1b 12939331 12939977 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008564 acox-1.1 F08A8.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08A8.1b 12939331 12939977 1
CDS:F08A8.1b 12940552 12940816 1
CDS:F08A8.1b 12940864 12941214 1
CDS:F08A8.1b 12941646 12941927 1
CDS:F08A8.1b 12941977 12942120 1

1 Sequence

Length
1689

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08A8.1b.1 F08A8.1b.1 2513   I: 12938556-12942223
Transcript:F08A8.1b.2 F08A8.1b.2 2016   I: 12938732-12942227