WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A8.4.1 Sequence Name  F08A8.4.1
Length (nt)  2070   Chromosome Location  I: 12951134-12954003
Chromosome . Primary Identifier  I Chromosome Location . Start  12951134
Chromosome Location . End  12954003 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008567 acox-1.4 F08A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A8.4 F08A8.4 1989   I: 12951140-12951253

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A8.4.1 12951134 12954003 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33219   120   I: 12951134-12951253 Caenorhabditis elegans
Exon33220   191   I: 12951308-12951498 Caenorhabditis elegans
Exon33221   161   I: 12951556-12951716 Caenorhabditis elegans
Exon33222   514   I: 12951807-12952320 Caenorhabditis elegans
Exon33223   265   I: 12952374-12952638 Caenorhabditis elegans
Exon33224   333   I: 12952685-12953017 Caenorhabditis elegans
Exon33225   276   I: 12953476-12953751 Caenorhabditis elegans
Exon33226   210   I: 12953794-12954003 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A8.4.1 12951134 12954003 1

1 Sequence

Length
2070

1 Sequence Ontology Term

Identifier Name Description
transcript