WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A8.7.1 Sequence Name  F08A8.7.1
Length (nt)  1134   Chromosome Location  I: 12958640-12959932
Chromosome . Primary Identifier  I Chromosome Location . Start  12958640
Chromosome Location . End  12959932 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A8.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008569 fbxa-101 F08A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A8.7 F08A8.7 1029   I: 12958732-12958935

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A8.7.1 12958640 12959932 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33245   296   I: 12958640-12958935 Caenorhabditis elegans
Exon33246   682   I: 12958983-12959664 Caenorhabditis elegans
Exon33247   84   I: 12959722-12959805 Caenorhabditis elegans
Exon33248   72   I: 12959861-12959932 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A8.7.1 12958640 12959932 -1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
transcript