WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47B2.1.1 Sequence Name  C47B2.1.1
Length (nt)  1148   Chromosome Location  I: 12960313-12961619
Chromosome . Primary Identifier  I Chromosome Location . Start  12960313
Chromosome Location . End  12961619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47B2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008130 fbxa-140 C47B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47B2.1 C47B2.1 987   I: 12960372-12960632

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47B2.1.1 12960313 12961619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33249   320   I: 12960313-12960632 Caenorhabditis elegans
Exon33250   673   I: 12960682-12961354 Caenorhabditis elegans
Exon33251   84   I: 12961409-12961492 Caenorhabditis elegans
Exon33252   71   I: 12961549-12961619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47B2.1.1 12960313 12961619 -1

1 Sequence

Length
1148

1 Sequence Ontology Term

Identifier Name Description
transcript