WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47B2.6a Sequence Name  C47B2.6a
Length (nt)  1044   Chromosome Location  I: 12975206-12975320
Chromosome . Primary Identifier  I Chromosome Location . Start  12975206
Chromosome Location . End  12975320
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47B2.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17566 GALE-1, isoform a 37.7 347 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042653
WBRNAi00003176
WBRNAi00029897

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47B2.6a 12975206 12975320 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008132 gale-1 C47B2.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47B2.6a 12975206 12975320 1
CDS:C47B2.6a 12975406 12975635 1
CDS:C47B2.6a 12976511 12976939 1
CDS:C47B2.6a 12977556 12977669 1
CDS:C47B2.6a 12978345 12978500 1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47B2.6a.1 C47B2.6a.1 1384   I: 12970241-12978787
Transcript:C47B2.6a.2 C47B2.6a.2 1354   I: 12975183-12978787