WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:CC4.2.1 Sequence Name  CC4.2.1
Length (nt)  743   Chromosome Location  I: 12988231-12995475
Chromosome . Primary Identifier  I Chromosome Location . Start  12988231
Chromosome Location . End  12995475 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CC4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003753 nlp-15 CC4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CC4.2 CC4.2 432   I: 12988275-12988334

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:CC4.2.1 12988231 12995475 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33328   104   I: 12988231-12988334 Caenorhabditis elegans
Exon33329   195   I: 12994227-12994421 Caenorhabditis elegans
Exon33330   144   I: 12994908-12995051 Caenorhabditis elegans
Exon33331   84   I: 12995103-12995186 Caenorhabditis elegans
Exon33332   216   I: 12995260-12995475 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:CC4.2.1 12988231 12995475 1

1 Sequence

Length
743

1 Sequence Ontology Term

Identifier Name Description
transcript