WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05B5.2.1 Sequence Name  W05B5.2.1
Length (nt)  1886   Chromosome Location  I: 13050445-13057461
Chromosome . Primary Identifier  I Chromosome Location . Start  13050445
Chromosome Location . End  13057461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05B5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012275 npr-14 W05B5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05B5.2 W05B5.2 1278   I: 13050461-13050603

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05B5.2.1 13050445 13057461 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33442   159   I: 13050445-13050603 Caenorhabditis elegans
Exon33443   88   I: 13051275-13051362 Caenorhabditis elegans
Exon33444   147   I: 13053390-13053536 Caenorhabditis elegans
Exon33445   115   I: 13053589-13053703 Caenorhabditis elegans
Exon33446   95   I: 13053748-13053842 Caenorhabditis elegans
Exon33447   155   I: 13054044-13054198 Caenorhabditis elegans
Exon33448   111   I: 13054454-13054564 Caenorhabditis elegans
Exon33449   122   I: 13055029-13055150 Caenorhabditis elegans
Exon33451   497   I: 13055986-13056482 Caenorhabditis elegans
Exon33455   397   I: 13057065-13057461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05B5.2.1 13050445 13057461 1

1 Sequence

Length
1886

1 Sequence Ontology Term

Identifier Name Description
transcript