WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W05B5.3a Sequence Name  W05B5.3a
Length (nt)  1545   Chromosome Location  I: 13056151-13056462
Chromosome . Primary Identifier  I Chromosome Location . Start  13056151
Chromosome Location . End  13056462
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05B5.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26023 NHR-85, isoform a 56.1 514 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00054818
WBRNAi00063691
WBRNAi00004567
WBRNAi00036299
WBRNAi00063672
WBRNAi00063673
WBRNAi00063681

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W05B5.3a 13056151 13056462 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003675 nhr-85 W05B5.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:W05B5.3a 13056151 13056462 -1
CDS:W05B5.3a 13057051 13057422 -1
CDS:W05B5.3a 13057786 13057935 -1
CDS:W05B5.3a 13058016 13058179 -1
CDS:W05B5.3a 13058976 13059120 -1
CDS:W05B5.3a 13059504 13059625 -1
CDS:W05B5.3a 13061822 13062101 -1

1 Sequence

Length
1545

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W05B5.3a.1 W05B5.3a.1 2516   I: 13055201-13062122