WormMine: MRNA Transcript:W05B5.3a.1

• WormMine ID: Transcript:W05B5.3a.1
• Sequence Name: W05B5.3a.1
• Length (nt): 2516
• Chromosome Location: I: 13055201-13062122
• Chromosome . Primary Identifier: I
• Chromosome Location . Start: 13055201
• Chromosome Location . End: 13062122
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: W05B5.3a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00003675	nhr-85	W05B5.3	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:W05B5.3a	W05B5.3a	1545	I: 13056151-13056462

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: Transcript:W05B5.3a.1
• Start: 13055201
• End: 13062122
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

7 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon33476			1262	I: 13055201-13056462	Caenorhabditis elegans
Exon33479			372	I: 13057051-13057422	Caenorhabditis elegans
Exon33482			150	I: 13057786-13057935	Caenorhabditis elegans
Exon33484			164	I: 13058016-13058179	Caenorhabditis elegans
Exon33486			145	I: 13058976-13059120	Caenorhabditis elegans
Exon33488			122	I: 13059504-13059625	Caenorhabditis elegans
Exon33490			301	I: 13061822-13062122	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:W05B5.3a.1
• Start: 13055201
• End: 13062122
• Strand: -1

1 Sequence

• Length: 2516

1 Sequence Ontology Term

• Name: transcript