WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H1.5.1 Sequence Name  C17H1.5.1
Length (nt)  1206   Chromosome Location  I: 13113487-13116434
Chromosome . Primary Identifier  I Chromosome Location . Start  13113487
Chromosome Location . End  13116434 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007658 pals-4 C17H1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H1.5 C17H1.5 1056   I: 13113637-13113722

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H1.5.1 13113487 13116434 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33577   236   I: 13113487-13113722 Caenorhabditis elegans
Exon33579   148   I: 13114178-13114325 Caenorhabditis elegans
Exon33580   254   I: 13115084-13115337 Caenorhabditis elegans
Exon33581   172   I: 13115491-13115662 Caenorhabditis elegans
Exon33582   165   I: 13115706-13115870 Caenorhabditis elegans
Exon33583   231   I: 13116204-13116434 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H1.5.1 13113487 13116434 1

1 Sequence

Length
1206

1 Sequence Ontology Term

Identifier Name Description
transcript