WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H1.13a.1 Sequence Name  C17H1.13a.1
Length (nt)  890   Chromosome Location  I: 13124168-13125684
Chromosome . Primary Identifier  I Chromosome Location . Start  13124168
Chromosome Location . End  13125684 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H1.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044708 pals-11 C17H1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H1.13a C17H1.13a 882   I: 13124176-13124550

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H1.13a.1 13124168 13125684 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33596   383   I: 13124168-13124550 Caenorhabditis elegans
Exon33598   363   I: 13124593-13124955 Caenorhabditis elegans
Exon33600   144   I: 13125541-13125684 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H1.13a.1 13124168 13125684 -1

1 Sequence

Length
890

1 Sequence Ontology Term

Identifier Name Description
transcript