WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H1.7.1 Sequence Name  C17H1.7.1
Length (nt)  1449   Chromosome Location  I: 13136390-13138544
Chromosome . Primary Identifier  I Chromosome Location . Start  13136390
Chromosome Location . End  13138544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007660 pals-6 C17H1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H1.7 C17H1.7 1230   I: 13136586-13136969

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H1.7.1 13136390 13138544 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33624   580   I: 13136390-13136969 Caenorhabditis elegans
Exon33625   381   I: 13137278-13137658 Caenorhabditis elegans
Exon33626   255   I: 13137821-13138075 Caenorhabditis elegans
Exon33627   233   I: 13138312-13138544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H1.7.1 13136390 13138544 -1

1 Sequence

Length
1449

1 Sequence Ontology Term

Identifier Name Description
transcript