WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22G12.4c.1 Sequence Name  F22G12.4c.1
Length (nt)  2433   Chromosome Location  I: 13155400-13159174
Chromosome . Primary Identifier  I Chromosome Location . Start  13155400
Chromosome Location . End  13159174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22G12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009064 F22G12.4 F22G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22G12.4c F22G12.4c 2433   I: 13155400-13155626

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22G12.4c.1 13155400 13159174 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33648   227   I: 13155400-13155626 Caenorhabditis elegans
Exon33652   104   I: 13155685-13155788 Caenorhabditis elegans
Exon33655   219   I: 13155866-13156084 Caenorhabditis elegans
Exon33658   91   I: 13156144-13156234 Caenorhabditis elegans
Exon33663   373   I: 13156455-13156827 Caenorhabditis elegans
Exon33666   96   I: 13156880-13156975 Caenorhabditis elegans
Exon33669   285   I: 13157030-13157314 Caenorhabditis elegans
Exon33672   244   I: 13157447-13157690 Caenorhabditis elegans
Exon33675   124   I: 13157749-13157872 Caenorhabditis elegans
Exon33678   473   I: 13158299-13158771 Caenorhabditis elegans
Exon33681   178   I: 13158873-13159050 Caenorhabditis elegans
Exon33682   19   I: 13159156-13159174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22G12.4c.1 13155400 13159174 -1

1 Sequence

Length
2433

1 Sequence Ontology Term

Identifier Name Description
transcript