WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22G12.5a.1 Sequence Name  F22G12.5a.1
Length (nt)  7310   Chromosome Location  I: 13162492-13182726
Chromosome . Primary Identifier  I Chromosome Location . Start  13162492
Chromosome Location . End  13182726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22G12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009065 F22G12.5 F22G12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22G12.5a F22G12.5a 7011   I: 13162499-13162638

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22G12.5a.1 13162492 13182726 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33694   147   I: 13162492-13162638 Caenorhabditis elegans
Exon33695   85   I: 13164061-13164145 Caenorhabditis elegans
Exon33697   117   I: 13164201-13164317 Caenorhabditis elegans
Exon33699   173   I: 13164413-13164585 Caenorhabditis elegans
Exon33701   175   I: 13164713-13164887 Caenorhabditis elegans
Exon33703   274   I: 13165241-13165514 Caenorhabditis elegans
Exon33705   159   I: 13166126-13166284 Caenorhabditis elegans
Exon33707   643   I: 13166924-13167566 Caenorhabditis elegans
Exon33710   380   I: 13168328-13168707 Caenorhabditis elegans
Exon33711   157   I: 13168845-13169001 Caenorhabditis elegans
Exon33713   442   I: 13170012-13170453 Caenorhabditis elegans
Exon33715   171   I: 13171599-13171769 Caenorhabditis elegans
Exon33717   153   I: 13171848-13172000 Caenorhabditis elegans
Exon33719   116   I: 13172159-13172274 Caenorhabditis elegans
Exon33721   160   I: 13172465-13172624 Caenorhabditis elegans
Exon33724   267   I: 13173157-13173423 Caenorhabditis elegans
Exon33727   241   I: 13173476-13173716 Caenorhabditis elegans
Exon33730   81   I: 13174482-13174562 Caenorhabditis elegans
Exon33733   185   I: 13174625-13174809 Caenorhabditis elegans
Exon33736   324   I: 13175172-13175495 Caenorhabditis elegans
Exon33739   200   I: 13177232-13177431 Caenorhabditis elegans
Exon33742   170   I: 13177591-13177760 Caenorhabditis elegans
Exon33745   1145   I: 13178211-13179355 Caenorhabditis elegans
Exon33748   125   I: 13179892-13180016 Caenorhabditis elegans
Exon33751   218   I: 13180060-13180277 Caenorhabditis elegans
Exon33754   359   I: 13180633-13180991 Caenorhabditis elegans
Exon33757   119   I: 13181321-13181439 Caenorhabditis elegans
Exon33760   139   I: 13181739-13181877 Caenorhabditis elegans
Exon33765   385   I: 13182342-13182726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22G12.5a.1 13162492 13182726 1

1 Sequence

Length
7310

1 Sequence Ontology Term

Identifier Name Description
transcript