WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17B5.2.1 Sequence Name  F17B5.2.1
Length (nt)  2183   Chromosome Location  I: 13191902-13194645
Chromosome . Primary Identifier  I Chromosome Location . Start  13191902
Chromosome Location . End  13194645 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17B5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008906 oac-17 F17B5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17B5.2 F17B5.2 2031   I: 13191983-13192225

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17B5.2.1 13191902 13194645 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33787   324   I: 13191902-13192225 Caenorhabditis elegans
Exon33788   314   I: 13192277-13192590 Caenorhabditis elegans
Exon33789   127   I: 13192637-13192763 Caenorhabditis elegans
Exon33790   332   I: 13192813-13193144 Caenorhabditis elegans
Exon33791   167   I: 13193251-13193417 Caenorhabditis elegans
Exon33792   220   I: 13193465-13193684 Caenorhabditis elegans
Exon33793   87   I: 13193728-13193814 Caenorhabditis elegans
Exon33795   139   I: 13193860-13193998 Caenorhabditis elegans
Exon33796   265   I: 13194040-13194304 Caenorhabditis elegans
Exon33797   208   I: 13194438-13194645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17B5.2.1 13191902 13194645 -1

1 Sequence

Length
2183

1 Sequence Ontology Term

Identifier Name Description
transcript