WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1053.5.1 Sequence Name  ZK1053.5.1
Length (nt)  1010   Chromosome Location  I: 13235348-13236663
Chromosome . Primary Identifier  I Chromosome Location . Start  13235348
Chromosome Location . End  13236663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1053.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014200 scrm-2 ZK1053.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1053.5 ZK1053.5 798   I: 13235367-13235729

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1053.5.1 13235348 13236663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33883   382   I: 13235348-13235729 Caenorhabditis elegans
Exon33884   243   I: 13235894-13236136 Caenorhabditis elegans
Exon33885   103   I: 13236180-13236282 Caenorhabditis elegans
Exon33886   59   I: 13236327-13236385 Caenorhabditis elegans
Exon33887   223   I: 13236441-13236663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1053.5.1 13235348 13236663 1

1 Sequence

Length
1010

1 Sequence Ontology Term

Identifier Name Description
transcript