WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E5.6.1 Sequence Name  M01E5.6.1
Length (nt)  2221   Chromosome Location  I: 13298204-13300716
Chromosome . Primary Identifier  I Chromosome Location . Start  13298204
Chromosome Location . End  13300716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010808 sepa-1 M01E5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E5.6 M01E5.6 2109   I: 13298301-13298356

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E5.6.1 13298204 13300716 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34018   153   I: 13298204-13298356 Caenorhabditis elegans
Exon34019   372   I: 13298522-13298893 Caenorhabditis elegans
Exon34020   1696   I: 13299021-13300716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E5.6.1 13298204 13300716 -1

1 Sequence

Length
2221

1 Sequence Ontology Term

Identifier Name Description
transcript