WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04D3.5.2 Sequence Name  T04D3.5.2
Length (nt)  1186   Chromosome Location  I: 13329174-13330947
Chromosome . Primary Identifier  I Chromosome Location . Start  13329174
Chromosome Location . End  13330947 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04D3.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011434 T04D3.5 T04D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04D3.5 T04D3.5 903   I: 13329314-13329481

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04D3.5.2 13329174 13330947 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34036   308   I: 13329174-13329481 Caenorhabditis elegans
Exon34039   628   I: 13329975-13330602 Caenorhabditis elegans
Exon34040   123   I: 13330651-13330773 Caenorhabditis elegans
Exon34043   127   I: 13330821-13330947 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04D3.5.2 13329174 13330947 -1

1 Sequence

Length
1186

1 Sequence Ontology Term

Identifier Name Description
transcript