WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08E3.3a.1 Sequence Name  W08E3.3a.1
Length (nt)  1424   Chromosome Location  I: 13340327-13343952
Chromosome . Primary Identifier  I Chromosome Location . Start  13340327
Chromosome Location . End  13343952 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08E3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012344 ola-1 W08E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08E3.3a W08E3.3a 1188   I: 13340349-13340534

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08E3.3a.1 13340327 13343952 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34086   208   I: 13340327-13340534 Caenorhabditis elegans
Exon34088   220   I: 13340920-13341139 Caenorhabditis elegans
Exon34090   668   I: 13342069-13342736 Caenorhabditis elegans
Exon34094   328   I: 13343625-13343952 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08E3.3a.1 13340327 13343952 1

1 Sequence

Length
1424

1 Sequence Ontology Term

Identifier Name Description
transcript