WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08E3.1.1 Sequence Name  W08E3.1.1
Length (nt)  719   Chromosome Location  I: 13339397-13340224
Chromosome . Primary Identifier  I Chromosome Location . Start  13339397
Chromosome Location . End  13340224 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08E3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004915 snr-2 W08E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08E3.1 W08E3.1 483   I: 13339431-13339433

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08E3.1.1 13339397 13340224 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34109   37   I: 13339397-13339433 Caenorhabditis elegans
Exon34110   171   I: 13339487-13339657 Caenorhabditis elegans
Exon34111   511   I: 13339714-13340224 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08E3.1.1 13339397 13340224 1

1 Sequence

Length
719

1 Sequence Ontology Term

Identifier Name Description
transcript