WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01A2.3.1 Sequence Name  C01A2.3.1
Length (nt)  1351   Chromosome Location  I: 13387819-13391205
Chromosome . Primary Identifier  I Chromosome Location . Start  13387819
Chromosome Location . End  13391205 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01A2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007215 oxa-1 C01A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01A2.3 C01A2.3 1101   I: 13387832-13388120

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01A2.3.1 13387819 13391205 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34168   302   I: 13387819-13388120 Caenorhabditis elegans
Exon34169   554   I: 13388927-13389480 Caenorhabditis elegans
Exon34170   166   I: 13389835-13390000 Caenorhabditis elegans
Exon34171   329   I: 13390877-13391205 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01A2.3.1 13387819 13391205 1

1 Sequence

Length
1351

1 Sequence Ontology Term

Identifier Name Description
transcript