WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G10A.4a.1 Sequence Name  Y48G10A.4a.1
Length (nt)  3114   Chromosome Location  I: 13455356-13470371
Chromosome . Primary Identifier  I Chromosome Location . Start  13455356
Chromosome Location . End  13470371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G10A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013021 ints-8 Y48G10A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G10A.4a Y48G10A.4a 2934   I: 13455516-13455644

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.4a.1 13455356 13470371 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34258   289   I: 13455356-13455644 Caenorhabditis elegans
Exon34262   478   I: 13458975-13459452 Caenorhabditis elegans
Exon34265   372   I: 13460592-13460963 Caenorhabditis elegans
Exon34267   59   I: 13461341-13461399 Caenorhabditis elegans
Exon34269   524   I: 13462215-13462738 Caenorhabditis elegans
Exon34273   174   I: 13464762-13464935 Caenorhabditis elegans
Exon34274   545   I: 13466189-13466733 Caenorhabditis elegans
Exon34275   372   I: 13468872-13469243 Caenorhabditis elegans
Exon34276   181   I: 13470020-13470200 Caenorhabditis elegans
Exon34277   120   I: 13470252-13470371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.4a.1 13455356 13470371 -1

1 Sequence

Length
3114

1 Sequence Ontology Term

Identifier Name Description
transcript