WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G10A.4b.1 Sequence Name  Y48G10A.4b.1
Length (nt)  1647   Chromosome Location  I: 13455516-13464846
Chromosome . Primary Identifier  I Chromosome Location . Start  13455516
Chromosome Location . End  13464846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G10A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013021 ints-8 Y48G10A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G10A.4b Y48G10A.4b 1647   I: 13455516-13455644

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.4b.1 13455516 13464846 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34259   129   I: 13455516-13455644 Caenorhabditis elegans
Exon34263   478   I: 13458975-13459452 Caenorhabditis elegans
Exon34266   372   I: 13460592-13460963 Caenorhabditis elegans
Exon34268   59   I: 13461341-13461399 Caenorhabditis elegans
Exon34270   524   I: 13462215-13462738 Caenorhabditis elegans
Exon34272   85   I: 13464762-13464846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.4b.1 13455516 13464846 -1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
transcript